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Frascoli2014 - A dynamical model of tumour immunotherapy Lab

About lab

This is a coupled ordinary differential equation model of tumour-immune dynamics, accounting for biological and clinical factors which regulate the interaction rates of cytotoxic T lymphocytes on the. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagefrascoli2014-a-dynamical-model-of-tumour-immunotherapy-lab
Created2026-05-15
Updated2026-05-15
immunologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_tumor_volume",
        "label": "Initial Tumor Volume",
        "units": "native source value",
        "default": 1,
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.initial_tumor_volume",
        "description": "Initial Tumor Volume. Sets the initial value of bundled SBML species `V_Tumor_Volume`."
      },
      {
        "name": "initial_cytotoxic_t_lymphocytes_coverage",
        "label": "Initial Cytotoxic T Lymphocytes Coverage",
        "units": "native source value",
        "default": 0.1,
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.initial_cytotoxic_t_lymphocytes_coverage",
        "description": "Initial Cytotoxic T Lymphocytes Coverage. Sets the initial value of bundled SBML species `C_Cytotoxic_T_Lymphocytes_Coverage`."
      },
      {
        "name": "tumor_killing_cytotoxic_t_lymphocytes_rate",
        "label": "Tumor Killing Cytotoxic T Lymphocytes Rate",
        "units": "native source value",
        "default": 0.2,
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.tumor_killing_cytotoxic_t_lymphocytes_rate",
        "description": "Tumor Killing Cytotoxic T Lymphocytes Rate. Sets bundled SBML parameter `k`."
      }
    ],
    "outputs": [
      {
        "name": "tumor_volume",
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.tumor_volume"
      },
      {
        "name": "cytotoxic_t_lymphocytes_coverage",
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.cytotoxic_t_lymphocytes_coverage"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.species_labels"
      }
    ]
  },
  "title": "Frascoli2014 - A dynamical model of tumour immunotherapy Lab",
  "models": [
    {
      "path": "owned/models/immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model",
      "alias": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model",
      "provenance": {
        "owned_path": "owned/models/immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model_state"
      ],
      "from": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model_summary"
      ],
      "from": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model_species_labels"
      ],
      "from": "immunology_sbml_frascoli2014_a_dynamical_model_of_tumour_immunot_biomd0000000787_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "This is a coupled ordinary differential equation model of tumour-immune dynamics, accounting for biological and clinical factors which regulate the interaction rates of cytotoxic T lymphocytes on the. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
  "schema_version": "2.0"
}

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