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Yapo2017 - A2AR/cAMP/PKA signalling in D2 dopamine receptor expressing medium-spiny neurons Lab

About lab

Clean Biosimulant lab for systems signaling model: Yapo2017 - A2AR/cAMP/PKA signalling in D2 dopamine receptor expressing medium-spiny neurons. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
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Metadata

Packageyapo2017-a2ar-camp-pka-signalling-in-d2-dopamine-receptor-expres
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicamp-pkagpcrneurosciencephysiologyvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_adenosine",
        "label": "Initial adenosine",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.initial_adenosine",
        "description": "Initial level of adenosine. Maps to SBML symbol `Adn`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_amp",
        "label": "Initial AMP",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.initial_amp",
        "description": "Initial level of AMP. Maps to SBML symbol `AMP`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_atp",
        "label": "Initial ATP",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.initial_atp",
        "description": "Initial level of ATP. Maps to SBML symbol `ATP`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "camp",
        "label": "cAMP",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.camp",
        "description": "cAMP. Maps to SBML symbol `cAMP` and is emitted in native SBML units."
      },
      {
        "name": "pde10_c_amp",
        "label": "PDE10 C AMP",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.pde10_c_amp",
        "description": "PDE10 C AMP. Maps to SBML symbol `PDE10_cAMP` and is emitted in native SBML units."
      },
      {
        "name": "pkac_amp2",
        "label": "Pkac AMP2",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.pkac_amp2",
        "description": "Pkac AMP2. Maps to SBML symbol `PKAcAMP2` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "camp-pka",
    "gpcr",
    "neuroscience",
    "physiology"
  ],
  "title": "Yapo2017 - A2AR/cAMP/PKA signalling in D2 dopamine receptor expressing medium-spiny neurons Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model",
      "alias": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model_state"
      ],
      "from": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model_summary"
      ],
      "from": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model_species_labels"
      ],
      "from": "signaling_sbml_yapo2017_a2ar_camp_pka_signalling_in_d2_dopamine_model1701170001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for systems signaling model: Yapo2017 - A2AR/cAMP/PKA signalling in D2 dopamine receptor expressing medium-spiny neurons. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

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